Definitely some marketing & sales guys had the engineers design that "feature" in that required the garage to select the battery type via a secret, hidden parameter in the diagnostics system - complete rubbish!
They could as easily have had the system monitor the voltage and charge current and adjust the charging accordingly, or simply allowed the user the ability to set it from inside the car -- or, heaven forbid, simply use a wet-cell friendly charge rate profile and lived with the longer charge times for the batteries.
When we get to Lipo batteries in cars, this is only going to get worse..