If the lever is mushy then you've probably just got a lot of air in the line, which is hampering the hydraulic action. Pump like crazy with the bleeders open or try as Bob suggests (don't inject fluid into the bleeders with a full reservoir though!).
If the lever is relatively firm I'd make sure your new banjo fittings are lining up properly.
FYI, a cheap luer-lock syringe will readily thread onto clear plastic tubing... I think 3/16" is the size I usually use. Very useful not only for brakes, but also fork oil, driveshaft oil, wet cell batteries, etc.