Update!
First off, I have to say just amazed I am at how EASY this bike is to work on. My brief venture into fixing up a basketcase 1976 Honda Goldwing was much different. Granted, it hadn't run in who knows how many years, while my r65 has only been down for one but still... I've got to appreciate the simplicity and great design of this machine.
So anyway, spent Saturday morning tearing the r65 down. One hangup I had was that I couldn't get the swingarm back far enough to slip a piece of wood in to hold it. The custom saddlebags were interfering so I ended up removing the entire rear end. Good anyway as I want to re-grease the final drive splines. Transmission came out quite easily!

And it confirmed my suspicion. The input splines were stripped. While obviously ruined on the transmissison side, they were better than I thought. They actually stripped out on one side more than the other.

But the clutch was shredded smooth. Too bad, as the clutch measured well within it's specs... still had a lot of life left in it.

And lots of grit:

Other clutch pieces were in good shape, though obviously streaked with lots of grease/oil. Not sure if I can reuse them. I might just buy everything new.

Now the potentially bad part. When I removed the flywheel, the teeth on the BACK side (engine facing side) had been chewed up. I can't find where it was rubbing but it was obviously rubbing, and fresh, as the metal was bright. However, the damage wasn't even all the way 'round the flywheel. It was worse on one side. Bolts were snug, as they should be and I could detect no movement when it was mounted. Have any of you seen this type of damage?

Finally, I removed the oil pump housing cover and noticed that there were rub marks on the inside. Is this normal? (This is after I removed the old, squared-off O-ring and cleaned it.

Also dropped the oil pan and scrubbed it clean. There were a few pieces of something in the bottom of the pan. Not metal... slivers of plastic, I'd say. Four or five, about 1/4" long and brittle. They crumbled when I rolled them in my fingers. Thoughts?
So, it's obvious I'm going to have to buy an entire new clutch assembly. All this I've read about putting everything 120 degrees apart due to weight fluctuations. Will the new pieces I buy be marked on the heavy side so I know? Otherwise, how the heck do I find out where the heavy side is of each piece? Or is it REALLY that important ... ?