When you adjust your valves, you need to rotate the engine.
Some folks put their transmission into 2nd or 3rd gear and turn the rear wheel.
I prefer to remove the front cover, and turn it with my 3/8" ratchet w/allen driver inserted into the alternator bolt. If you do it this way, remember to disconnect any and all ground wires from the battery before removing the cover (you can short out on the diode board, and possibly damage some diodes).
You also want to turn the engine in the direction of normal rotation, i.e. clockwise when looking at the engine from the front.
When working on one side, you want that piston at top dead center on the compression stroke. This will have both the intake & the exhaust valves in the "relaxed" position.