Well, my R65 is from 1982 and has a very different loom, so I can't help you with pictures.
But having done the same work on a different bike (not BMW) I may offer you a process.
First, place on the frame the parts like the regulator, starter relay, ignition coils...
Then search your loom for the mating connectors (here the wiring diagram comes to help)
Then try to lay the loom as smoothly and securely as possible and see if it fits and connect the various connectors.
Lastly, plug the loose plugs to the various bits and pieces not having a connector. If everything plugs into place double check that the loom will not interfere with the tank, steering, etc... And then tie the loom to the frame.
Cross all your fingers (toes included) install the battery and turn the ignition on. If everything is good, the lights will come on without smoke.
Before going for a well deserved beer, take some pictures for the next time and to show us your work.