So it will not make the sound when running, in neutral, on the centerstand, at any RPM ?
It still could be a loose muffler part or any of a number of possible things that just happens to have a narrow frequency of vibration, the engine itself usually has a vibratory "peak" around 4500 RPM, give or take a hundred RPM or so.
Timing chain/tensioner could be the source of the sound but it is often an "always there, sometimes louder than others depending on RPM" situation.
Might be time to get out the mechanics stethoscope / large screwdriver to listen at the engine case near the timing cover and other areas (with the bike not moving, of course!!)